posted on 2022-10-06, 07:51authored byDavid Russell
Cation diffusion facilitators are a diverse family of transporters
responsible for the efflux of zinc and other divalent metals from cells. Several putative
members of this family were selected as potential targets for research with the intent of
removing difficult targets as problems arose. Of particular interest was the smallest
target, MmCDF3, from Maricaulis maris, due to having no apparent C-terminal
cytoplasmic domain, yet seemingly maintaining the tetrahedral zinc-coordinating active
site and six transmembrane helices found in all known CDFs.
This study focused on the expression, purification, characterisation and
crystallisation of members of the CDF family, specifically targets from M. maris. High
level expression (6-7 mg/L) and purity has been obtained for the MmCDF1 and
MmCDF3 proteins, although both could only be obtained in a heavily aggregated state
when purified in DDM.
Acquiring CDF proteins in a non-aggregated stable form was necessary for
repeatable crystallisation experiments and was accomplished by means of a detergent
exchange in the presence of high salt concentrations. MmCDF3 was determined to be
stable after an exchange with the detergent FC12, but only into a mixed micelle
consisting of both FC12 and DDM. Investigations into the exact nature of the micelle
containing stable MmCDF3 were performed by constructing mixed micelles of specific
detergent ratios.
Determination of function was performed by isothermal titration calorimetry,
which showed that MmCDF3 was capable of binding zinc and cadmium ions, although
in a much reduced fashion to the larger CDF proteins. This study did highlight a
potential mechanism through which MmCDF3 and other smaller CDFs might bind their
substrate ions in the cytoplasm.
Following successful recovery of the stable homogenous protein, crystallisation
was attempted with little success. However, now that a method has been established for
obtaining a pure, homogenous and stable CDF protein, further crystallisation studies can
be attempted.
Funding
A new method for transforming data to normality with application to density estimation