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An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography
Butryn, Agata; Simon, Philipp S.; Aller, Pierre; Hinchliffe, Philip; Massad, Ramzi N.; Leen, Gabriel; Tooke, Catherine L.; Bogacz, Isabel; Kim, In-Sik; Bhowmick, Asmit; Brewster, Aaron S.; Devenish, Nicholas E.; Brem, Jürgen; Kamps, Jos J. A. G.; Lang, Pauline A.; Rabe, Patrick; Axford, Danny; Beale, John H.; Davy, Bradley; Ebrahim, Ali; Orlans, Julien; Storm, Selina L.S.; Zhou, Tiankun; Owada, Shigeki; Tanaka, Rie; Tono, Kensuke; Evans, Gwyndaf; Owen, Robin L.; Houle, Frances A.; Sauter, Nicholas K.; Schofield, Christopher J.; Spencer, James; Yachandra, Vittal K.; Yano, Junko; Kern, Jan F.; Orville, Allen M.
Date
2021
Abstract
Serial femtosecond crystallography has opened up many new opportunities in structural biology. In recent years, several approaches employing light-inducible systems have emerged to enable time-resolved experiments that reveal protein dynamics at high atomic and tem poral resolutions. However, very few enzymes are light-dependent, whereas macromolecules requiring ligand diffusion into an active site are ubiquitous. In this work we present a drop-on drop sample delivery system that enables the study of enzyme-catalyzed reactions in microcrystal slurries. The system delivers ligand solutions in bursts of multiple picoliter-sized drops on top of a larger crystal-containing drop inducing turbulent mixing and transports the mixture to the X-ray interaction region with temporal resolution. We demonstrate mixing using fluorescent dyes, numerical simulations and time-resolved serial femtosecond crys tallography, which show rapid ligand diffusion through microdroplets. The drop-on-drop method has the potential to be widely applicable to serial crystallography studies, particularly of enzyme reactions with small molecule substrates.
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peer-reviewed
Publisher
Nature Publishing Group
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Leen_2021_On_Demand.pdf
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National Institutes of Health (NIH), Biological Sciences Research Council, Royal Society Wolfson
