posted on 2020-02-21, 10:13authored byMichael P. Ryan, Shannon Slattery, Tony J. Pembroke
ICEpMERPH, the first integrative conjugative element (ICE) of the SXT/R391 family isolated
in the United Kingdom and Europe, was analyzed to determine the nature of its adaptive functions,
its genetic structure, and its homology to related elements normally found in pathogenic Vibrio or
Proteus species. Whole genome sequencing of Escherichia coli (E. coli) isolate K802 (which contains
the ICEpMERPH) was carried out using Illumina sequencing technology. ICEpMERPH has a size of
110 Kb and 112 putative open reading frames (ORFs). The “hotspot regions” of the element were found
to contain putative restriction digestion systems, insertion sequences, and heavy metal resistance genes
that encoded resistance to mercury, as previously reported, but also surprisingly to arsenate. A novel
arsenate resistance system was identified in hotspot 4 of the element, unrelated to other SXT/R391
elements. This arsenate resistance system was potentially linked to two genes: orf69, encoding an
organoarsenical e ux major facilitator superfamily (MFS) transporter-like protein related to ArsJ, and
orf70, encoding nicotinamide adenine dinucleotide (NAD)-dependent glyceraldehyde-3-phosphate
dehydrogenase. Phenotypic analysis using isogenic strains of Escherichia coli strain AB1157 with
and without the ICEpMERPH revealed resistance to low levels of arsenate in the range of 1–5 mM.
This novel, low-level resistance may have an important adaptive function in polluted environments,
which often contain low levels of arsenate contamination. A bioinformatic analysis on the novel
determinant and the phylogeny of ICEpMERPH was presented